Early fate bias in neuroepithelial progenitors of hippocampal neurogenesis

Leonie von Berlin, Jakub Orzechowski Westholm, Michael Ratz*, Jonas Frisén* (*equal last authors)

Hippocampus, vol. 33(4), 2023, pp. 391-401

Clonally heritable gene expression imparts a layer of diversity within cell types

Jeff E Mold*, Martin H Weissman*, Michael Ratz**, Michael Hagemann-Jensen**, Joanna Hård, Carl-Johan Eriksson, Hosein Toosi, Joseph Berghenstråhle, Leonie von Berlin, Marcel Martin, Kim Blom, Jens Lagergren, Joakim Lundeberg, Rickard Sandberg, Jakob Michaëlsson***, Jonas Frisén*** (* Equal First Authors, ** Equal second Authors, *** Equal Last authors)

bioRxiv preprint, 2022

Clonal relations in the mouse brain revealed by single-cell and spatial transcriptomics

Michael Ratz, Leonie von Berlin, Ludvig Larsson, Marcel Martin, Jakub Orzechowski Westholm, Gioele La Manno, Joakim Lundeberg, Jonas Frisén

Nature Neuroscience, vol. 25(3), 2022, pp. 285-294

Volumetric live cell imaging with three-dimensional parallelized RESOLFT microscopy

Andreas Bodén, Francesca Pennacchietti, Giovanna Coceano, Martina Damenti, Michael Ratz, Ilaria Testa

Nature Biotechnology, vol. 39, 2021, pp. 609–618

Single-cell transcriptomics of human embryos identifies multiple sympathoblast lineages with potential implications for neuroblastoma origin

Polina Kameneva, Artem V Artemov, Maria Eleni Kastriti, Louis Faure, Thale K Olsen, Jörg Otte, Alek Erickson, Bettina Semsch, Emma R Andersson, Michael Ratz, Jonas Frisen, Arthur S Tischler, Ronald R de Krijger, Thibault Bouderlique, Natalia Akkuratova, Maria Vorontsova, Oleg Gusev, Kaj Fried, Erik Sundström, Shenglin Mei, Per Kogner, Ninib Baryawno, Peter V Kharchenko, Igor Adameyko

Nature Genetics, vol. 53(5), 2021, pp. 694-706

Single cell biology-a Keystone Symposia report

Jennifer Cable, Michael B Elowitz, Ana I Domingos, Naomi Habib, Shalev Itzkovitz, Homaira Hamidzada, Michael S Balzer, Itai Yanai, Prisca Liberali, Jessica Whited, Aaron Streets, Long Cai, Andrew B Stergachis, Clarice Kit Yee Hong, Leeat Keren, Martin Guilliams, Uri Alon, Alex K Shalek, Regan Hamel, Sarah J Pfau, Arjun Raj, Stephen R Quake, Nancy R Zhang, Jean Fan, Cole Trapnell, Bo Wang, Noah F Greenwald, Roser Vento-Tormo, Silvia DM Santos, Sabrina L Spencer, Hernan G Garcia, Geethika Arekatla, Federico Gaiti, Rinat Arbel-Goren, Steffen Rulands, Jan Philipp Junker, Allon M Klein, Samantha A Morris, John I Murray, Kate E Galloway, Michael Ratz, Merrit Romeike

Annals of the New York Academy of Sciences, 2021 Oct 3

Two-color 810 nm STED nanoscopy of living cells with endogenous SNAP-tagged fusion proteins

Alexey N Butkevich, Haisen Ta, Michael Ratz, Stefan Stoldt, Stefan Jakobs, Vladimir N Belov, Stefan W Hell

ACS Chemical Biology, vol. 13(2), 2018, pp. 475-480

Enhanced photon collection enables four dimensional fluorescence nanoscopy of living systems

Luciano A Masullo, Andreas Bodén, Francesca Pennacchietti, Giovanna Coceano, Michael Ratz, Ilaria Testa

Nature Communications, vol. 9(1), 2018, p. 3281

STRT-seq-2i: dual-index 5ʹ single cell and nucleus RNA-seq on an addressable microwell array

Hannah Hochgerner, Peter Lönnerberg, Rebecca Hodge, Jaromir Mikes, Abeer Heskol, Hermann Hubschle, Philip Lin, Simone Picelli, Gioele La Manno, Michael Ratz, Jude Dunne, Syed Husain, Ed Lein, Maithreyan Srinivasan, Amit Zeisel, Sten Linnarsson

Scientific reports, vol. 7(1), 2017, p. 16327

CRISPR/Cas9-mediated endogenous protein tagging for RESOLFT super-resolution microscopy of living human cells

Michael Ratz, Ilaria Testa, Stefan W Hell, Stefan Jakobs

Scientific reports, vol. 5(1), 2015, p. 9592

Nanoscopy with more than 100,000'doughnuts'

Andriy Chmyrov, Jan Keller, Tim Grotjohann, Michael Ratz, Elisa d'Este, Stefan Jakobs, Christian Eggeling, Stefan W Hell

Nature methods, vol. 10(8), 2013, pp. 737-740